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Undiagnosed Diseases Network Grand Rounds 2025: Is a Genome Always Necessary? (RECORDING)


Undiagnosed Diseases Network Grand Rounds 2025: Is a Genome Always Necessary? (RECORDING) Banner

  • Overview
  • Faculty
  • Begin


Date & Location
Monday, May 5, 2025, 12:00 AM - Thursday, May 4, 2028, 11:59 PM, On Demand

Overview

In clinical practice, when an exome is non-diagnostic, next steps have included waiting for a time-lapsed re-analysis or proceeding with a genome. In this recorded webinar, Vandana Shashi, MBBS and Rebecca Spillmann, MS, CGC present 4 Undiagnosed Diseases Network (UDN) cases where exome sequencing and re-analysis and targeted genetic testing had already occurred and subsequently genome sequencing was performed in the UDN. In retrospect, in each of the four cases, the variants could have been reported from prior data/testing. They review the four diagnosed cases to delineate how the diagnoses occurred in the UDN and why they had not been made previously.


Registration

  Release Date: May 5, 2025
  Expiration Date: 
May 4, 2028
  Estimated Time to Complete: 
49 minutes
  Registration Fee:
 FREE
*Originally recorded on April 10, 2025

Click the Begin tab to launch this course. 


Credits
AMA PRA Category 1 Credits™ (0.75 hours), Non-Physician Participation Credit (0.75 hours)

Objectives
At the conclusion of this activity, learners should be able to:

  1. Identify the nuances of variant interpretation in exome and genome sequencing analyses, to understand the difference between variant detection and variant prioritization.
  2. Recognize the importance of the UDN n-of-1 approach in resolving non-diagnostic exome sequencing.
  3. Identify the limitations of exome sequencing and genetic testing through clinical laboratories.

Accreditation

In support of improving patient care, Stanford Medicine is jointly accredited by the Accreditation Council for Continuing Medical Education (ACCME), the Accreditation Council for Pharmacy Education (ACPE), and the American Nurses Credentialing Center (ANCC), to provide continuing education for the healthcare team.

Credit Designation 
American Medical Association (AMA) 
Stanford Medicine designates this Enduring Material for a maximum of 0.75 AMA PRA Category 1 CreditsTM.  Physicians should claim only the credit commensurate with the extent of their participation in the activity. 


Additional Information

Accessibility Statement
 Stanford University School of Medicine is committed to ensuring that its programs, services, goods and facilities are accessible to individuals with disabilities as specified under Section 504 of the Rehabilitation Act of 1973 and the Americans with Disabilities Amendments Act of 2008. If you have needs that require special accommodations, please contact the coordinator.

Cultural and Linguistic Competency
The planners and speakers of this CME activity have been encouraged to address cultural issues relevant to their topic area for the purpose of complying with California Assembly Bill 1195. Moreover, the Stanford University School of Medicine Multicultural Health Portal contains many useful cultural and linguistic competency tools including culture guides, language access information and pertinent state and federal laws. You are encouraged to visit the Multicultural Health Portal: https://laneguides.stanford.edu/multicultural-health

References/Bibliography

Alrohaif, H., Töpf, A., Evangelista, T., Lek, M., McArthur, D., & Lochmüller, H. (2018). Whole-exome sequencing identifies mutations in MYMK in a mild form of Carey-Fineman-Ziter syndrome. Neurology. Genetics, 4(2), e226. https://doi.org/10.1212/NXG.0000000000000226

Belkadi, A., Bolze, A., Itan, Y., Cobat, A., Vincent, Q. B., Antipenko, A., Shang, L., Boisson, B., Casanova, J. L., & Abel, L. (2015). Whole-genome sequencing is more powerful than whole-exome sequencing for detecting exome variants. Proceedings of the National Academy of Sciences of the United States of America, 112(17), 5473–5478. https://doi.org/10.1073/pnas.1418631112

Chong, J. X., Berger, S. I., Baxter, S., Smith, E., Xiao, C., Calame, D. G., Hawley, M. H., Rivera-Munoz, E. A., DiTroia, S., Genomics Research to Elucidate the Genetics of Rare Diseases (GREGoR) Consortium, Bamshad, M. J., & Rehm, H. L. (2024). Considerations for reporting variants in novel candidate genes identified during clinical genomic testing. Genetics in medicine: official journal of the American College of Medical Genetics, 26(10), 101199. https://doi.org/10.1016/j.gim.2024.101199

Di Gioia, S. A., Connors, S., Matsunami, N., Cannavino, J., Rose, M. F., Gilette, N. M., Artoni, P., de Macena Sobreira, N. L., Chan, W. M., Webb, B. D., Robson, C. D., Cheng, L., Van Ryzin, C., Ramirez-Martinez, A., Mohassel, P., Leppert, M., Scholand, M. B., Grunseich, C., Ferreira, C. R., Hartman, T., … Engle, E. C. (2017). A defect in myoblast fusion underlies Carey-Fineman-Ziter syndrome. Nature communications, 8, 16077. https://doi.org/10.1038/ncomms16077

Fenwick, A. L., Kliszczak, M., Cooper, F., Murray, J., Sanchez-Pulido, L., Twigg, S. R., Goriely, A., McGowan, S. J., Miller, K. A., Taylor, I. B., Logan, C., WGS500 Consortium, Bozdogan, S., Danda, S., Dixon, J., Elsayed, S. M., Elsobky, E., Gardham, A., Hoffer, M. J., Koopmans, M., … Bicknell, L. S. (2016). Mutations in CDC45, Encoding an Essential Component of the Pre-initiation Complex, Cause Meier-Gorlin Syndrome and Craniosynostosis. American journal of human genetics, 99(1), 125–138. https://doi.org/10.1016/j.ajhg.2016.05.019

Knapp, K. M., Fellows, B., Aggarwal, S., Dalal, A., & Bicknell, L. S. (2021). A synonymous variant in a non-canonical exon of CDC45 disrupts splicing in two affected sibs with Meier-Gorlin syndrome with craniosynostosis. European journal of medical genetics, 64(4), 104182. https://doi.org/10.1016/j.ejmg.2021.104182

Li, X., Zhang, L. Z., Yu, L., Long, Z. L., Lin, A. Y., & Gou, C. Y. (2021). Prenatal diagnosis of Meier-Gorlin syndrome 7: a case presentation. BMC pregnancy and childbirth, 21(1), 381. https://doi.org/10.1186/s12884-021-03868-5

Mor-Shaked, H., Salah, S., Yanovsky-Dagan, S., Meiner, V., Atawneh, O. M., Abu-Libdeh, B., Elpeleg, O., & Harel, T. (2021). Biallelic deletion in a minimal CAPN15 intron in siblings with a recognizable syndrome of congenital malformations and developmental delay. Clinical genetics, 99(4), 577–582. https://doi.org/10.1111/cge.13920

Schoch, K., Ruegg, M. S. G., Fellows, B. J., Cao, J., Uhrig, S., Einsele-Scholz, S., Biskup, S., Hawarden, S. R. A., Salpietro, V., Capra, V., Undiagnosed Diseases Network, Brown, C. M., Accogli, A., Shashi, V., & Bicknell, L. S. (2024). A second hotspot for pathogenic exon-skipping variants in CDC45. European journal of human genetics : EJHG, 32(7), 786–794. https://doi.org/10.1038/s41431-024-01583-1

Shashi, V., Schoch, K., Spillmann, R., Cope, H., Tan, Q. K., Walley, N., Pena, L., McConkie-Rosell, A., Jiang, Y. H., Stong, N., Need, A. C., Goldstein, D. B., & Undiagnosed Diseases Network (2019). A comprehensive iterative approach is highly effective in diagnosing individuals who are exome negative. Genetics in medicine : official journal of the American College of Medical Genetics, 21(1), 161–172. https://doi.org/10.1038/s41436-018-0044-2

Splinter, K., Adams, D. R., Bacino, C. A., Bellen, H. J., Bernstein, J. A., Cheatle-Jarvela, A. M., Eng, C. M., Esteves, C., Gahl, W. A., Hamid, R., Jacob, H. J., Kikani, B., Koeller, D. M., Kohane, I. S., Lee, B. H., Loscalzo, J., Luo, X., McCray, A. T., Metz, T. O., Mulvihill, J. J., … Undiagnosed Diseases Network (2018). Effect of Genetic Diagnosis on Patients with Previously Undiagnosed Disease. The New England journal of medicine, 379(22), 2131–2139. https://doi.org/10.1056/NEJMoa1714458

Tan, N. B., Stapleton, R., Stark, Z., Delatycki, M. B., Yeung, A., Hunter, M. F., Amor, D. J., Brown, N. J., Stutterd, C. A., McGillivray, G., Yap, P., Regan, M., Chong, B., Fanjul Fernandez, M., Marum, J., Phelan, D., Pais, L. S., White, S. M., Lunke, S., & Tan, T. Y. (2020). Evaluating systematic reanalysis of clinical genomic data in rare disease from single center experience and literature review. Molecular genetics & genomic medicine, 8(11), e1508. https://doi.org/10.1002/mgg3.1508

Zha, C., Farah, C. A., Holt, R. J., Ceroni, F., Al-Abdi, L., Thuriot, F., Khan, A. O., Helaby, R., Lévesque, S., Alkuraya, F. S., Kraus, A., Ragge, N. K., & Sossin, W. S. (2020). Biallelic variants in the small optic lobe calpain CAPN15 are associated with congenital eye anomalies, deafness and other neurodevelopmental deficits. Human molecular genetics, 29(18), 3054–3063. https://doi.org/10.1093/hmg/ddaa198

For activity related questions, please contact
     Name: Holly Meyer
     Title: Compliance Coordinator
     Email: [email protected]

For CME general questions, please contact 
 
   Email: [email protected]



Mitigation of Relevant Financial Relationships


Stanford Medicine adheres to the Standards for Integrity and Independence in Accredited Continuing Education.

There are no relevant financial relationships with ACCME-defined ineligible companies for anyone who was in control of the content of this activity, except those listed in the table below. 

All of the relevant financial relationships listed for these individuals have been mitigated.



Member Information
Role in activity
Nature of Relationship(s) / Name of Ineligible Company(s)
Matthew Thomas Wheeler, MD
Assistant Professor
SHC
Course Director
Grant or research support-Bristol-Myers Squibb|Grant or research support-Novartis AG (Relationship has ended)|Grant or research support-Pfizer, Inc. (Relationship has ended)|Grant or research support-Salubris|Consulting Fee-Cytokinetics|Grant or research support-Alexion|Grant or research support-Eidos|Stocks or stock options, excluding diversified mutual funds-Personalis
Jon Adam Bernstein, MD, PhD
Stanford University
Course Director and Reviewer, Reviewer
Nothing to disclose
Vandana Shashi, MBBS, MD

Faculty
Nothing to disclose
Becky Spillmann, MS, CGC

Faculty
Nothing to disclose
Emily Glanton, MS, CGC
Harvard Medical School
Planner
Stock options in a privately held company-Color Health, Inc.
Grant Wells
Stanford University
Planner
Nothing to disclose

Undiagnosed Diseases Network Grand Rounds 2025: Is a Genome Always Necessary? Recording module
Vandana Shashi, MBBS and Rebecca Spillmann, MS, CGC
Launch Video Claim CE

 

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